Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCPQTITFSPCLTNVGNTGTPPAYDSQCCKLVRDPKWTDQCLCAVVSSHF--PGVDETKALNLAHDCGRRVPKGIYCDGRPVPP
1N89 Chain:A ((4-65))
-----ASQLAVCASAILSG-AKP--SGECCGNLRAQ--Q-GCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVP------------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11127 for 372 contacts (-29.9/contact) +
2D Compatibility (PS) -6450 + (NN) -6000 + (LL) 204
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -26373.0 ( -70.90 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: