Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGCDILKLTPCVAASRNAKVMPSRQCCSNIAGMGKG---L--PGAKCLCSLLSHPLARSQ-GVAPRIALGIPQKCRIAVP----RGFVCQGIRVPGS
2ALG Chain:A ((6-90))
--QVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQ-LSASVPGVNPNNAAALPGKCGVSIPYKISASTNCAT------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31410 for 471 contacts (-66.7/contact) +
2D Compatibility (PS) -7523 + (NN) -655 + (LL) 200
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: -42888.0 ( -91.06 by residue)
QMean score : 0.148
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: