Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACGS-SYDLAACLPAAESDIQ-PSAQCCTQLSSYLATDT-----PEECLCQTAYSPFFQS-GADIQFAIKIPQKCNLSYR----AGIQCNGNTIPGGQ
1AFH Chain:A ((4-91))
-CGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSR-------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37229 for 550 contacts (-67.7/contact) +
2D Compatibility (PS) -7743 + (NN) 186 + (LL) 128
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -47308.0 ( -86.01 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: