Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATAQCRSLTEYSPCLDAVTTGAEPTDQCCETLAGVMSMDDG-----LACLCDALTSDAASSLGIRTSDAVQLPSKCQAKTGLTYTHGYNCKGATVP
1BWO Chain:A ((5-88))
-----HVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIAR--GIHNLNEDNARSIPPKCGVNLPYTISLNIDCS-----
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14735 for 517 contacts (-28.5/contact) +
2D Compatibility (PS) -8385 + (NN) -4873 + (LL) 880
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -31613.0 ( -61.15 by residue)
QMean score : 0.254
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: