Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSLQQVAGCLDAVTKGATPTGSCCTQLGQVDAPCFCNLLAN--------GKY----SDAYVNNALHVPARCGSNSAAYAKFKGRNCAGYVVP
1PSY Chain:A ((63-116))
--------------------LQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV-------------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14144 for 202 contacts (-70.0/contact) +
2D Compatibility (PS) -4274 + (NN) -1421 + (LL) 2132
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -21107.0 ( -104.49 by residue)
QMean score : 0.167
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: