Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACNAMTLQPCLAASQGKVAPDPACCTAIKNIGLSA-DG----PQCLCTLATGPLAKAN-GVSADAAMAIPKKCGLPVP----KGFMCNNKPVPGS
1T12 Chain:A ((7-89))
--VTSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTC--LKSA-AGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSK------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17385 for 489 contacts (-35.6/contact) +
2D Compatibility (PS) -7608 + (NN) -4532 + (LL) 524
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -33301.0 ( -68.10 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: