Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCSPT--QLSPCAPAIIGNAAPTAACCGRVKA-----------HPASCLCKYKKDPNLKRY--VNSPNGKKLFAACKVRLPSC
2ALG Chain:A ((3-79))
-TCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQ-AACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11897 for 372 contacts (-32.0/contact) +
2D Compatibility (PS) -5907 + (NN) 830 + (LL) 364
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -22510.0 ( -60.51 by residue)
QMean score : 0.183
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: