Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSDCQNDIQMLETTCYKYVAKDAPTSPPSQECCDTMNGVDV----------PCVCSYLGAPGIKEN--ISMEKVFYVAQQCGVSIP-----GNCGGSKRA
1T12 Chain:A ((1-90))
AITCGQVTSNL-APCLAYLRNTG----PLGRCCGGVKALVNSARTTEDRQIACTC-LKS-A-AGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV--
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34577 for 478 contacts (-72.3/contact) +
2D Compatibility (PS) -7293 + (NN) -815 + (LL) 36
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -47049.0 ( -98.43 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: