Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EGCDNDRQDMIRECAKYQKFPKEPKKDPSKACCAVWQKADF----------PCLCKD-----V-TKELEKVAYVAKFCKWPFP----SGYKCGSYTFPLGQ
1T12 Chain:A ((3-90))
-TCGQVTSNL-APCLAYLRNT-G----PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3081 for 425 contacts (-7.2/contact) +
2D Compatibility (PS) -7179 + (NN) -4495 + (LL) 452
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -18603.0 ( -43.77 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: