Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPADQMALKLAPCLTAAKDPEASPSKSCCAAVVDIWGH-------STECLCAVLLSNTLKRF-GVKVEVAITIPKRCNIANRPIGYKCGDYTLPSLQD
1SIY Chain:A ((2-78))
-------TCGQVQGNLAQCIGFLQKG-GVVPPSCCTGVKNILNSSRTTADRRAVCSCL--KA-AAGAVRGINPNNAEALPGKCGVNIP----------------
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38249 for 493 contacts (-77.6/contact) +
2D Compatibility (PS) -7371 + (NN) -6043 + (LL) 776
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -54837.0 ( -111.23 by residue)
QMean score : 0.217
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: