Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCSDVIKDLRPCVNYLTSGTGKPPSACCAGASALQSAASSTADKKAACECIKSASKSL-NPNPQLAQALPANCGISLPYTISPSVDCSKIS
1BWO Chain:A ((1-90))
-IDCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV-
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39047 for 617 contacts (-63.3/contact) +
2D Compatibility (PS) -9694 + (NN) -6032 + (LL) 168
1D Compatibility (HY) -8800 + (ID) 1750
Total energy: -65155.0 ( -105.60 by residue)
QMean score : 0.667
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: