Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AECKNNIADLLPCQAAAQSETSTPSTECCTAVGKFKD--------DPACLCSTIAAAQAAGF-TIDAPVAATIPKRCKLDGYPTSCSKSK
2ALG Chain:A ((3-79))
-TCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQL-SASVPGVNPNNAAALPGKCGVSIP--------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30383 for 434 contacts (-70.0/contact) +
2D Compatibility (PS) -7070 + (NN) -2310 + (LL) 352
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -44111.0 ( -101.64 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: