Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQSCSDWTQLLDCQNAASDPSATPSGECCNRIRQYQN--------APDCLCTMLLAARNAAQSTGL-PFNLQAALSIPAKCHVQVP----SGYSCAGIPIPSS
1BWO Chain:A ((2-88))
--DCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIA-----R--GIHNLNEDNARSIPPKCGVNLPYTISLNIDCS-------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23050 for 476 contacts (-48.4/contact) +
2D Compatibility (PS) -7879 + (NN) -4595 + (LL) 588
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -39586.0 ( -83.16 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: