Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DPDQQPPCNSFMSVLSCQSATMSESAMPSPACCAALQKFH---------DADCLCQVLLSARSAAATANV-PFNLKAALEIPMKCALRTV-SAPPGYSCGGMVVPRSPPPTST
2ALG Chain:A ((3-90))
-----TCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--L--K-Q--LSASVPGVNPNNAAALPGKCGVSIPYKISASTNCAT------------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44129 for 501 contacts (-88.1/contact) +
2D Compatibility (PS) -8200 + (NN) -5310 + (LL) 948
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -58791.0 ( -117.35 by residue)
QMean score : 0.189
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: