Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AQCNGSPAMLASCLPATQSSTSFPGAQCCSSLTRFRGN--------PDCLCSTMLTARQQF-TFSVPNAFTIPERCGYANEIP----PHYKCGNYVVGH
1T12 Chain:A ((3-89))
-TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGAISGINLGKAAGLPSTCGVNI--PYKISPSTDCSK-----
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32050 for 502 contacts (-63.8/contact) +
2D Compatibility (PS) -7467 + (NN) -689 + (LL) 928
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -45378.0 ( -90.39 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: