Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDCNGLVTTVISQCSGSYGNGSPPSAGCCRAARAVSN----------GCLCPKVTPQIAAAVNKQRIQAMASACNRPLPRTCGALQF
1BWO Chain:A ((2-78))
-DCGHVDSLV-RPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLP--------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22628 for 433 contacts (-52.3/contact) +
2D Compatibility (PS) -6867 + (NN) -1865 + (LL) 932
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -34878.0 ( -80.55 by residue)
QMean score : 0.238
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: