Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCSNNYSALLPCAAATRSATATPSGACCKVVEGFKS--------NPACLCSTIAAAKAAGY-SINEHNAESIPTRCKLHGYTSCSKKN
2ALG Chain:A ((3-79))
-TCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQL-SASVPGVNPNNAAALPGKCGVSIP-------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36160 for 434 contacts (-83.3/contact) +
2D Compatibility (PS) -6977 + (NN) -514 + (LL) 384
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -48217.0 ( -111.10 by residue)
QMean score : 0.304
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: