Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDCNGLVTTVVSQCSGSYVNGSPPSAGCCGAARAVSD----------GCLCPKVTPQIADA--VNKQRIQAMASACNRPLP-----R-TCGALQFPSRK
1T12 Chain:A ((3-90))
-TCGQVTSNL-APCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTC-LKS-AAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33104 for 460 contacts (-72.0/contact) +
2D Compatibility (PS) -7040 + (NN) 14 + (LL) 140
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -44740.0 ( -97.26 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: