Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSGCTTVLIGMAPCLNYITGSSSSPSSSCCSQLASVVQ-------SQPRCLCVALNGGGAALGITINRTLALALPGACNVQTPPVSQCDAA
2ALG Chain:A ((3-79))
--TCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVP-GVNPNNAAALPGKCGVSIP--------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53392 for 446 contacts (-119.7/contact) +
2D Compatibility (PS) -7107 + (NN) -1455 + (LL) 1016
1D Compatibility (HY) -5200 + (ID) 1200
Total energy: -67338.0 ( -150.98 by residue)
QMean score : 0.147
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: