Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IPICNIETNDLVKCHPAFTGXNNPPPPGPDCCALVRAA--NLQCLCPY-KP----YL-SRFGID-----PSKVRPLLTRCGVNTPPSCF
3OB4 Chain:A ((428-488))
---------------------------QERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRC-
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21693 for 230 contacts (-94.3/contact) +
2D Compatibility (PS) -4823 + (NN) 1129 + (LL) 868
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -26319.0 ( -114.43 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: