Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANSSKERLCGAGAPLGHANGFPPSVYPFAFSGGIRRSPPFEVLANGGFFRSFPTDLPKEMASLSLTMGAAERSAHSDCISTVETQSTSSEEMVPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQINKVTRNRCQFCRLQKCFQVGMSKEAVRNDRNKKKKEIKEEVVLPDSYEMPPEMEELIQKVSKAHQETFPSLCQLGKYTTNSSADQRVQLDLGLWDKFSELSTKCIIKIVEFAKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFSFADQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVEKLQEPLLEALKFYARRRRPDKPYMFPRMLMKITDLRGISTKGAERAITLKLEIPGPMPPLIREMLENPEAFEDGAATPKPSERSSSESSNGSPTGEDSSGSKTP |
1FCZ Chain:A ((2-235)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PQLEELITKVSKAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLE-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143787 for 1847 contacts (-77.8/contact) +
2D Compatibility (PS) -25466 + (NN) -20284 + (LL) 8320
1D Compatibility (HY) -34800 + (ID) 10900
Total energy: -226917.0 ( -122.86 by residue)
QMean score : 0.813
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