Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLPILQVIIPIIASMLCFFTRKHKVSWFISFTTTIVTLFISSVLLIKTYNGETITYHLGNWAPPYGIELRIDVLNSLILTLVNFV-AL-ISVLYSFYIN-EKEISKNK-ITG-LYSLFLLCLSGLLGILVTND-IFNLYVFLEISSLSSYVLV-SMGKDKKA-LVAAFEYLISGTIGATFYLLGIGLLYSTTGTLNMSD-MAERIVPLYNNNIVKLGTLFIFVGLS-NKMALFPLSRWLVNSYSEAPSFVSIFFSGTVTKVMIYVFIRIFYTVFHQNFFLLKLPLSNVIIILALCAIVFGSIFAITAKDIRRLFAHSSVSQIGYIILVLSLNSKIALSAAILHIINHSIIKTSLFMVAGCISYKFGTTKIENLSGLKKSMPYIAFAFTLLSLALVGVPLT-NGFISKWYIINVIIESHARISLIVFVVGSFLALIYMWKAVEKMYFESDAVSCVEMTSGKTDVPFPMLFCPLFMATLTL-VVGVYSN-PIRLVVEKLVF |
| 1QS0 Chain:A ((1-407)) | NEYAPLRLHVPEPT------GRPGCQTDFSYLRLNDAGQARKPPVDVDAADTADLSYSLVRVLDEQG-DAQGPWAEDIDPQILRQGMRAML-KTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALALNRTDMCF--------PTYRQQSILMARDVSLVEMICQLL-----------------SNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMAS------------AIKGDTKIASAWIGDGATAE----------SDFHTALTFAHVYRAPVILNVVNNQWAISTF--QAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGP-SLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQ---------------------------YGTLANGHI--------PSAASMFEDVYKEMPDHLRRQRQEL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QS0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -369866 for 3341 contacts (-110.7/contact) +
2D Compatibility (PS) -40553 + (NN) -4018 + (LL) 10448
1D Compatibility (HY) 20000 + (ID) 2100
Total energy: -386089.0 ( -115.56 by residue)
QMean score : 0.234
|
|
|