Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSITSEKKKNLINTYAIKEDDTGSSFVQCAILTERISNLTEHFKVHKHDHHSKRGLLILIGRRRKHLNYIKRKFGDEAYQQLIEKLGIRK
1IBK Chain:O ((2-88))
-PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQRE-DPERYRALIEKLGIRG
General information:
TITO was launched using:
RESULT:
Template:
1IBK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30816 for 542 contacts (-56.9/contact) +
2D Compatibility (PS) -9282 + (NN) -3414 + (LL) 340
1D Compatibility (HY) -9200 + (ID) 2400
Total energy: -54772.0 ( -101.06 by residue)
QMean score : 0.680
(partial model without unconserved sides chains):
PDB file :
Tito_1IBK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IBK-query.scw
PDB file :
Tito_Scwrl_1IBK.pdb
: