Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAACRGYCRKIYLAIDNVLYAI--NETMVMWKKELK-----SLVKGNPTIFNDKLAISTL------DDCLYMLDMRMIVQSGPIISPVIMIVTK
2AD6 Chain:A ((121-185))
-------------KQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVR
General information:
TITO was launched using:
RESULT:
Template:
2AD6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32724 for 290 contacts (-112.8/contact) +
2D Compatibility (PS) -5253 + (NN) 5483 + (LL) 916
1D Compatibility (HY) -400 + (ID) 400
Total energy: -32378.0 ( -111.65 by residue)
QMean score : -0.017
(partial model without unconserved sides chains):
PDB file :
Tito_2AD6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AD6-query.scw
PDB file :
Tito_Scwrl_2AD6.pdb
: