Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVIVLKLPEVTVNWSYPVLNFDLSFRIILISFLSVAFLIVLPAKNFSFSEMLSFFAYTISSLCAILSKQIISVIIFCELMAISASFIIAAGCKDNGPAIRYACVHFFVGIILTAGLAIQNPNLIIMGLLIICACFPFSFWVVDAYPAASLHGASYLSLFTTKISFLIALLHTYNLWQDHAEILAFLGTITAIYGIIFTSLEQNIRRFLAYNVVGQMGILIMTGSLLSHSKNAIPLLILNIIFSIVYQLLLTAVANSIILRTKAVNFNRVGKFMSAEGIYALIAILTMAAFPGTAGFISKSYIAVEIKMNGTNLELYKNLHKILNLSLYLSVGLKFLYYIFITKSRSKLLAEKGGGVAMIILASICVIAGNPYLPIYNKPSIFNLAYNTKNIWSQLNLLLCVTLLFIPLRKLFLPRINLKMDIDWIFRALIPYVVSLFNKLIFKMRKISAGALQNLTNSLTNLYFNNANKLKEALSYDSVSFISASSLFLMSILLVLLCLNH |
4H13 Chain:E ((1-32)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MILGAVFYIVFIALFFGIAVGIIFAIKSIKLI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H13.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10584 for 137 contacts (-77.3/contact) +
2D Compatibility (PS) -3414 + (NN) -1408 + (LL) 41432
1D Compatibility (HY) -5600 + (ID) 500
Total energy: 19926.0 ( 145.45 by residue)
QMean score : 0.030
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