Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVVEIVIRNSTYKISCESGKKDHLLHLANSFNKLVSSISHKTGGKGSDTLNFLLAALILEDKVLELTKKLDEINQKRENYKNEKRTEYTEVLDRVNKIIECIKD
1N62 Chain:A ((4-31))
-AHIELTINGHPVEALVEPR--TLLIHFIREQQNLTGAHIGCDTSHCGACTVDLDGMSVKSCTMFAVQANGASITTIEGMAAPDGTLSALQEGFRMMHGLQCGYC
General information:
TITO was launched using:
RESULT:
Template:
1N62.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11690 for 124 contacts (-94.3/contact) +
2D Compatibility (PS) -3292 + (NN) -1274 + (LL) 336
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -18170.0 ( -146.53 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_1N62.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N62-query.scw
PDB file :
Tito_Scwrl_1N62.pdb
: