Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESRRGRIRPENSARELRLRQNRRNTGRMMMKEVTEGLRQFELKSEIERREREPETFEDGTRKLLMGLT
3BBP Chain:D ((55-66))
------------------------------------------LKSEIRRLERNQ---------------
General information:
TITO was launched using:
RESULT:
Template:
3BBP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 207 for 38 contacts (5.4/contact) +
2D Compatibility (PS) -1366 + (NN) -698 + (LL) 4188
1D Compatibility (HY) -800 + (ID) 400
Total energy: 1131.0 ( 29.76 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_3BBP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BBP-query.scw
PDB file :
Tito_Scwrl_3BBP.pdb
: