Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQYTFRIDNKDPLYKKLIKLPTAYYRLKHDGNKHNIHSNNNVILEIGNNTNGVKLRWENDKIVLHKGSSALY
1BW5 Chain:A ((1-66))
MKTTRVRTVLN---EKQLHTLRTCYAA----NPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMK
General information:
TITO was launched using:
RESULT:
Template:
1BW5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12277 for 329 contacts (37.3/contact) +
2D Compatibility (PS) -6802 + (NN) 5 + (LL) 168
1D Compatibility (HY) -400 + (ID) 600
Total energy: 4648.0 ( 14.13 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_1BW5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BW5-query.scw
PDB file :
Tito_Scwrl_1BW5.pdb
: