Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MSLSPAIFSIGPVSIHW-Y-SLAYVLGIVFAYWHLHKLDEQKIFTK-----------------NFYDSLLTATIIGIILGGRLGF-------VLIYDPISYINNP---------IEILKTWKGGMSFHGGAI----------GVLCAVIISCRRYNIPIFYTLDLISC-----------GVPIGLFLGRI---GNFVNGELFGRVTT-MP-WGMVFPESGDN---LLRHPSQLYEAFFEGLLFFAIANSLFF--LTRIRLYH-GTLTGI------AVIWYGTVRFVVEFFREPDYQVGYLWLDLTMGQLLSIFMTLLGI------------IVYLSALNSKFNTKSVA-------------------------------------------------- |
| 4INA Chain:A ((2-394)) | AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFDPGVTNVFCAYAQKHYFDEIHEIDILDCNAGDHGYPFATNFNPEINLREVSSKGRYWENGEWIETEPMEIMQVWDYPEVGPKDSYLLYH--EELESLVRNIK--GLKRIRFFMTFGQSYLTHMRCLENVGMLRIDEIEVNGCKVVPIQVLKALLPDPASL--ASRTKGKTNIGCYIKGIKEGKARTIYIYNVCDHESCYREVNAQAISYTTGVPAMIGAKLMLEGKWSGKGVFNMEELDPDPFMDELNKQGLPWEVKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4INA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115117 for 1676 contacts (-68.7/contact) +
2D Compatibility (PS) -25393 + (NN) 9340 + (LL) 428
1D Compatibility (HY) 17600 + (ID) 850
Total energy: -113992.0 ( -68.01 by residue)
QMean score : -0.110
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