Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MLFDCLIIFII-----VVCIII-------SITRGFIKELCALMFLFLS------AFLTANHYDFFTINYSKYFNSKAMQNIFSTISVFIIFNLIFMIVNNWLMYILTPIRLGLIDRVTGTFVGALRGVLLSYVLFFAMHLYCYTVHDKKEE-----------QSKIEAEDILPNWIINSYSYQALFATVEDIVDVYVP-ESLILKIKEIGEGMANQEKLKGDKKEE------------------------------------------------ 2DUB Chain:A ((3-261)) -NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQ----NRT-------FQDCYS-------HWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVG-KSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH

General information: TITO was launched using: RESULT: Template: 2DUB.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output 3D Compatibility (PKB) -222286 for 1377 contacts (-161.4/contact) + 2D Compatibility (PS) -19005 + (NN) -2476 + (LL) 2128 1D Compatibility (HY) -2800 + (ID) 1550 Total energy: -245989.0 ( -178.64 by residue) QMean score : 0.313

(partial model without unconserved sides chains): PDB file : Tito_2DUB.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2DUB-query.scw PDB file : Tito_Scwrl_2DUB.pdb: