Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQPEKTESTGLVLNIESPILIILCILSV-AYFIYSEYSVEFTKKISKNDPFSRALKNRNKLFKRFFMIR
2QJY Chain:B ((224-251))
---MARKQAGFTA------VMFLTVLSVLLYLTNKRLWAGVK---------------------------
General information:
TITO was launched using:
RESULT:
Template:
2QJY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12012 for 97 contacts (-123.8/contact) +
2D Compatibility (PS) -2742 + (NN) -734 + (LL) 2040
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -16148.0 ( -166.47 by residue)
QMean score : 0.158
(partial model without unconserved sides chains):
PDB file :
Tito_2QJY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QJY-query.scw
PDB file :
Tito_Scwrl_2QJY.pdb
: