Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVQFLKENRAKRSLEIDSTVITLAIITLSLALVVYSVIKGVQKVAAKKTDNILSEVESQKVVSPRQKV
3EYI Chain:A ((16-34))
-YRFLKDNGPQRALVIAQALGMRTAKDVNRDLYRMKSRHLLDMDEQSKAWTIY---------------
General information:
TITO was launched using:
RESULT:
Template:
3EYI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2911 for 80 contacts (36.4/contact) +
2D Compatibility (PS) -2015 + (NN) 96 + (LL) 2364
1D Compatibility (HY) -2400 + (ID) 350
Total energy: 606.0 ( 7.58 by residue)
QMean score : 0.947
(partial model without unconserved sides chains):
PDB file :
Tito_3EYI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EYI-query.scw
PDB file :
Tito_Scwrl_3EYI.pdb
: