Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDKKDNAKANSGKIMYPNFFEIDFIINEKEIDCNVTRMLIEKAKKGHKFGETWEDYYRSISDNKRISIYKNV------------------------------------------------------------------------------------------------------------------------- |
| 1Q87 Chain:A ((147-345)) | -SMCIGNSTPNEQETFRAKVDEIWFRLTQKTDGTVMRDFLIEKAAEYFKQPEQ--------PKQNAIEVISAIMAPQEEQTKSKADLYKFLAMFGPYETIMLKIASLLLISNNKGHWLTFDPQDSISGWFDQNEPNCLILKTPTGIRKIWNKPLIEATGQYLMDENGEKYDSWDKYFEMKPIAYPTFAPMHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11439 for 332 contacts (34.5/contact) +
2D Compatibility (PS) -6468 + (NN) 324 + (LL) 852
1D Compatibility (HY) -2400 + (ID) 700
Total energy: 3047.0 ( 9.18 by residue)
QMean score : 0.017
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