Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIVPKEMRDYTIGSGRSLLDIITEYFQELCEKSGFIKKEYRIERNVDNTFVLDRRVNEPAVTNNRKEIS
1QE0 Chain:A ((2-35))
-IKIPRGTQDILPE-DSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFAREMYTFKDKGDRSITLRPE
General information:
TITO was launched using:
RESULT:
Template:
1QE0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4288 for 127 contacts (-33.8/contact) +
2D Compatibility (PS) -3662 + (NN) -252 + (LL) 180
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -10272.0 ( -80.88 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_1QE0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QE0-query.scw
PDB file :
Tito_Scwrl_1QE0.pdb
: