Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSIYVTLSISLVLILLQVTVTFKDWDSYKEYIVQGLEKTYNAKV-HIGGKVEVSLITPKLTVHNVYMQCNNNKEQKLS-TLIGVNKIEVRPSILSLFLFSLQPKSITLLGMKSNRENFINIINAKTSSNAVDIVIKGSQVSLNNNFTDYDNIVNIEKVAIGKSKQFSGEIRVDSNDYDFSGKVNITKKNVHISVESNFINLLFTGKKNQAGLQGKLTLTINNSSDFINDLAKITNLSFLAYVIPGENIEISSNIDFNGNDFTATDLKIKSKSMQASGIIQNDRKSNHTNINISFSKVNLDSIRNSSRRIIDIKDLLECFRKVVPRNLSLDFNIEASNIQYQNKILDKSHAILKFADGEIKVDMLLKFPGTNNVSHLSGKVSNSGTLSEFNGNLLVKGDNFKSFISCFFPSIKIKGNQKNQFTLSSELHFAPRILSISNIRFLNDKEFLQGSIKVSHTKKHNVVGGRFSVHNLDAD--KYDYSLFSSLSKMGWLKNLRYDVSIKINANDFKLNDTKIKDLDFL-LKMEKGKLVVD-----KINLSGEDCDINGSTKILVDQR---YT-----KPLLEVNLTGNKFNGDIFKLPSFIEVKRDSRNKINQIQWS-TKQFDFLDNKESFDANVQINAIEFRVGQNVLKDFNLDAVVR----NNTVTMRQVSYALEHGQVFF----QGYLRSDSMYTKFLITNLDAKGIGKAIGIDNVDGRISLNGEIKAQGKSFHGWANNLSGEINLQAQEIEFTNVDFNSFITNLLNGKNKSEISTLAHDDIYNGSTLFENVIGKANIKNGVCSTSLQFRIDQASGSISSNLTLPNFALISLVRFFFILPGHSSPIYIDMHLDGPIWHPKMNFDVDQIFSTLKRIRSIKFIFAK-- |
| 4AQ1 Chain:A ((172-892)) | AVPEIVEVTAVNSTTVKVTFNTQIADVD-FTNFAIDNGLTVTKATLSRDKKSVEVVVNKP----------FTRNQEYTITATGIKNLKGETAKELTGKFVWSVQDAVTVALNNSSLKVGEESGLTVKDQDGKD---VVGAKVELTSS---NTNIVVVSSGEVSVSA--AKVTAVKPGTADVTAKVTLPDGV----VLTNTFKVTVTEVPVQVQNQG-FTLV-DNLSNAPQNTVAFNKAEKVTSMFAGETKTVAM-YDTKNGDPETKPVDFKDATVRSLNPIIATAAINGSELLVTANA------GQSGKASFEVT-----FKDNTKRTFTVDVKKEPV-------------------LQDIKVDA--------TSVKLSDEAVGGGEVEGVN-------------------QKTIKVSAVDQY--GKEIKFGTK-----------------GKVTVTTNTEGLVIKNVNSDNTIDFDSGNSATDQFVVVATKDKIVNGKVEVKYFKNASDTTPTSTKTITVNVVNVKADATPVGLDIVAPSEIDVNAPNTASTADVDFINFESVEIYTLDSNGNRLKKVTPTATTLVGT----NDYVEVNG------NVLQFKGNDELTLLTSSSTVNVDVTADGITKRIPVKYINSASVPASATVATSPVTVKLNSSDNDLTFEELIFGVIDPTQLVKDEDINEFIAVSKAAKNDGYLYNKPLVTVKDA-SGEVIPTGANVYG---------------LNHDATNGNIWFDEEQAGLAKK------FSDVH-----------------FDVDFSLANVVKTGSGTVSSSPSLSD---------AIQLTNSGDAVSFTLVIKS-IYVKGADKDDNNL---LAAPVSVNVTVTKGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45859 for 5305 contacts (-8.6/contact) +
2D Compatibility (PS) -72823 + (NN) 2616 + (LL) 11928
1D Compatibility (HY) -16800 + (ID) 6500
Total energy: -127438.0 ( -24.02 by residue)
QMean score : 0.203
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