Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTISPILPVYSPININFSYGKGIYLYNIDGKRYIDFHSGIAVSSLGHTNLQLTSVLNLQGERLWHISNTYNIPTANNFAEKLINNSFADTVFFANSGSEAVECGLKIARVYQNGKGNKNRYRILTFHGAFHGRTFLTCATNDKRKFSELLNPYIDWCDNIEPN-IESVKKAISNDIGVMLIEPIQGQGGIKVMNDAFMKELRKLCDENDILLFFDCIQCGTGRTGKLFAYEHIGVKPDICALAKGIGGGFPLGVCLATEK-AAQYITVGMHGSTFGGNPLATSVGNAVLDKLLSPGFLGNVEIRGKHLKNKLEDLASKFPIIEEVRGKGLMLGIKVKMDNQ--KFAGELSHRGLLTVGATSDNVVRIFPPLIITEKEIDEGIEILTQYLSEKSSDPYQYER |
| 3NX3 Chain:A ((9-392)) | ---SHIIPTYKRFDIVLEKGQGVYLFDDKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAMKTARKYAFNKGVKGG-QFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGLSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDKSVKVAKVIQKCQENALLLI-SCGENDLRFLPPLILQKEHIDEMSEKLRKALKSF--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -255999 for 3314 contacts (-77.2/contact) +
2D Compatibility (PS) -41302 + (NN) -20705 + (LL) 464
1D Compatibility (HY) -24800 + (ID) 7000
Total energy: -349342.0 ( -105.41 by residue)
QMean score : 0.499
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