Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MSKDTVITEEIIEHAKYYVKHKSHI---SEYPGGLESEKQVLTKILGFLEGKFN-NMQLDSDLVDK----PATLNQAVDEADDEQLQSPEPKSADGC--- |
| 1DD3 Chain:A ((1-128)) | MTIDEIIEAIEKLTVSELAELVKKLEDKFGVTAAAPVAVAAAPVAGAAAGAAQEEKTEFDVVLKSFGQNKIQVIKVVREITGLGLKEAKDLVEKAGSPDAVIKSGVSKEEAEEIKKKLEEAGAEVELK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9645 for 556 contacts (17.3/contact) +
2D Compatibility (PS) -9099 + (NN) 591 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -1013.0 ( -1.82 by residue)
QMean score : 0.035
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