Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPVVHLLPNNDLAQFNYRHVKIDGILSDIELYVFAGQSGYHALSPMLLTTGRYMLVNKGIVREKEEKKAKIAKVVADGVLYCDSSKSKSWLIKNDIALNTWFTLSTEEISNELGIELEKCILWQKGFSGKLAIQPMKHLEYAITWFALSLIWLIMCIAYYRQNKCHLSS
1HUQ Chain:A ((38-95))
--------------AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1HUQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6998 for 262 contacts (-26.7/contact) +
2D Compatibility (PS) -6442 + (NN) -2313 + (LL) 2884
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -16119.0 ( -61.52 by residue)
QMean score : -0.032
(partial model without unconserved sides chains):
PDB file :
Tito_1HUQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HUQ-query.scw
PDB file :
Tito_Scwrl_1HUQ.pdb
: