Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENLAYKLIKVTEAAALAAYKLVGLGDEKKADQVAVDAMRTVLNSMEINGTIVIGEGERDKAPMLYVGEKVGTGN--------GP----EIDIAVDPLEGTTICAHYKQSAMSVLAAAKKGDFLHAPDIYMEKIAIGKDLPIGVVSLKNSVEKNFDNLAQAKKCEVNDLTVTILKRERHNNLILKIRKLGARVKLIDDGDIAAIVSLINGSHDIY--IGIGGAPEGVLAAAALSSIGGQMEGRLIFDTHQSK------------ERAKILNIDDLEKIYSIKDMVKGESV-FIATGVTSGELVDGVKFGYNICSTSSLIMLHNKVIKLQTIQNLC |
| 3RPL Chain:D ((38-354)) | --TLGLEIIEVVEQAAIASAKWMGKGEKNTADQVAVEAMRERMNKIHMRGRIVIGEGERDDAPMLYIGEEVGICTREDAKSFCNPDELVEIDIAVDPCEGTNLVAYGQNGSMAVLAISEKGGLFAAPDFYMKKLA-APPAAKGHVDIDKSATENLKILSDCLNRSIEELVVVVMDRPRHKELIQEIRNAGARVRLISDGDVSAAISCAFSGTNIHALMGIGAAPEGVISAAAMRCLGGHFQGQLIYDPEVVKTGLIGESREGNLERLASMGIKNPDQVYNCEELACGETVLFAACGITPGTLMEGVRFFHGGVRTQSLVISSQSSTARFVDTVHM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187510 for 2588 contacts (-72.5/contact) +
2D Compatibility (PS) -31727 + (NN) -12704 + (LL) 516
1D Compatibility (HY) -25200 + (ID) 6400
Total energy: -263025.0 ( -101.63 by residue)
QMean score : 0.535
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