Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYYDDGIPVFDSLDKLTKPNSMKVVSSDSSEKGDIVLEPLESGFALTLGNALRRVMLSSLIGSAVYGIKIDGITHEFTSIQGVREDVTDIVLNMGMLRCKLNGTSNKCLSLSAKGPCQVLAGMIETDDQCSIVNKDLLICTLG-QDVELNMTIYVASGKGYLPV-TKYKENEFLKPMNEQDLISFIPVNALYSPINRVSYRVENSRVGQVTDKDKLILSVETDGTISPSQAVDSAARILQEQLQPFISSDISYKKSQVSSPSGYKDLGYDPILLRKVDEMELSVRSHNCLKNENITYIGDLVQKTESEMLRTANFGRKSLNEIKAVLNNFGLSLGMDIPDWPPKDIDELARQHTDED |
4MEY Chain:A ((26-330)) | ----------------------------SSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTR---------------IGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVD------------PE------FDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPA------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MEY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -189232 for 1963 contacts (-96.4/contact) +
2D Compatibility (PS) -29312 + (NN) -8040 + (LL) 3228
1D Compatibility (HY) -29600 + (ID) 7050
Total energy: -260006.0 ( -132.45 by residue)
QMean score : 0.479
|
|
|