Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIKNFQNNNDWSELLVSVRRVTTVTKGGRRFSFSILVVVGDEKGRVGCGMGKHAEVAEARIKAVNAAKKSMIRVYLREGRTLHHDIKAKFCSGEIVLRAARAGTGIIAGGAIRSVFEVLGIKDVVAKSTRSNNPHNVICAVFKAFDNMLSPRQVASKRGKKISEVVGNR
1IBL Chain:E ((5-142))
----------DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQNG-TIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLRKG---------
General information:
TITO was launched using:
RESULT:
Template:
1IBL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103018 for 1123 contacts (-91.7/contact) +
2D Compatibility (PS) -14976 + (NN) -5852 + (LL) 1160
1D Compatibility (HY) -10800 + (ID) 2900
Total energy: -136386.0 ( -121.45 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_1IBL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IBL-query.scw
PDB file :
Tito_Scwrl_1IBL.pdb
: