Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKKVFCGVVTKAKCDKTVKVSVLRVYKDKLYKKVIKRYKEYTVHDENNSCKEGDKVFIQEHRPISATKKWVIVRVE
1XNR Chain:Q ((2-76))
-PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLV
General information:
TITO was launched using:
RESULT:
Template:
1XNR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22013 for 459 contacts (-48.0/contact) +
2D Compatibility (PS) -8176 + (NN) -1355 + (LL) 208
1D Compatibility (HY) -6000 + (ID) 1850
Total energy: -39186.0 ( -85.37 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_1XNR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XNR-query.scw
PDB file :
Tito_Scwrl_1XNR.pdb
: