Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSISLSVLDDSVLIK--PINEEKQGGIVLPSSAEKKPTKGEVIAIGEGSRNSSGERIALTVKAGDKVFYRQWAGTEIEH-GSEKLIVMKESDILAIIK
3ZQ1 Chain:O ((6-96))
--------LHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVE
General information:
TITO was launched using:
RESULT:
Template:
3ZQ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10983 for 500 contacts (-22.0/contact) +
2D Compatibility (PS) -9322 + (NN) 345 + (LL) 668
1D Compatibility (HY) -8400 + (ID) 1900
Total energy: -29592.0 ( -59.18 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_3ZQ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZQ1-query.scw
PDB file :
Tito_Scwrl_3ZQ1.pdb
: