Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPKHYPDTISSPDFSSLEKEIIKFWQENKIFEQSV-EKRSKDNCFVFYDGPPFANGLPHYGHLLTGFIKDAFARYQTMLQKKVERRFGWDCHGLPAEMGAEKELGISGRTEIEKFGIEKFNNYCRTSVMKFSSEWEKYVNRQARWVDFHNDY-KTMDRSFMESVIWA---FKQLYDKGLVYESVRVVPYSWACETPLSNFETRLDTAYRKKT-----SKAVTVAFELLENPQQFKQKCKLLAWTTTPWTLPSN-LALAIGKDIEYCAVSVHSSVSFQHVTLESREKETWIPLSRTG-MTEEGTETVTEDNEVSLVNNEIYIFAEDYLEKFIGHCEQNNIPYENCNTKLKADDLAGLSYKPLFNYFKG----TKNAFRVFIADYVTGEDGTGVVHTAPGFGEEDFYLCQSHDI---PAICPIDNSGRFTAEVSDLTGIHVFDTNDAIIKKLKEQGNWFKTEQYIHNYPHCWRTDTPLIYRAMPSWYVAVTKFKERMIELNKRVNWIPTHIRDGQFGKWLERAHDWSISRNRFWGTPIPIWKSDNARYPRVDVYGSIAELERDFNVKVNDLHRPFIDSLTRPNPDDPT-GKSIMRRVP-----DVFDCWFESGSVPFAQVHYPFENKEWFESN-----FPADFITEYIAQTR------GWFYTLFVLSTALFDSEPFKNCICHGVVL-------------------------DVKGQ------------------KLSKRLNNYADPMEVFDKYGSDALRFLMLSGSIVCGGNLFLNKEGSSIRDVLKNVMKPIWNSYHFFTMYANADGIKAEVCKDYKSTIDSYMIFKCFEAVESIQASMSNYNSQEACKILIDFFEVLNNWYIRRSRERFWKSNLDQDKTDAYNVLYTVFYYILRAAVPLLPLITETIWQGLKYKEISVHLADFPQLERYDSELIAKMDLVREICNSALSIRNTFNIRVRQPLGSMTVYHQSSCSFLESKPLSVVIPKFSPVIPMRDTGTQKEKKWSNAEMKTSMNEYQEMIKDEVNVKELKLVNSLEGIASLELKLNFPMLGKRIPDKVKKLVQYVKEGKWKQVDNEQVFLGNESESYIIEKDEYELLLKTNSEYSSVFGDNKGIVILNTALDDALVLEGLARDVVRLIQEARKQADFHISDRIRVIIKTEDEKIKRAINTWGEYIREQTLSLSLEINIEIGDNFYSKEYQDLIVGIELNC |
| 3ZJT Chain:A ((30-797)) | -----------------IESKVQLHWDEKRTFEVTEDESKEKYYCLSML---PYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVK------------------NN---TAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAV------------------------EIPQWFIKITAYADELLNDLD------KLDHWPDTVKTMQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNPE------------------LAAFIDECR---------NT----------EKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVILAADGS-----------------EPDLSQQALTEKGVLFNSGEF-----------NGLDHEAA---FNAIADKLTAMGVGERKVNY---------------RLRDWGVSRQRYWGAPIPMVTLED---------GTVMPTPDD-QLPVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTFMES-SWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFAS---PADMTLEWQESGVEGA-NRFLKRVWKLVYEHTAKGDVAALNVDALTENQKAL-RRDVHKTIAKVTDDIGRRQTFNTAIAA-----IMELMN---------KLAKAPTDGEQDRA--LMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVEDSTLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLNLVVG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZJT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227112 for 5135 contacts (-44.2/contact) +
2D Compatibility (PS) -68010 + (NN) -13323 + (LL) 25932
1D Compatibility (HY) -29200 + (ID) 9200
Total energy: -320913.0 ( -62.50 by residue)
QMean score : 0.253
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