Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MNTLVNILFIMIPLLFSVAYLVYFERK--VIGAIQLRHGPSVVGPFGLLQPFADAI---KLLVKEPIIPFRANTILFIMAPMLT---------FILALIVWAVIPFGAEVITENGQQIVIPKVIANVNIGVLYVLAISSLGIYGIIVAGWSSNSNYAFLGSIRSAAQMIS-----------YEVSMGLIVATVVITTGTLNLGE--------------------------MVATKHSMPFWIDLLMMPIGVVFFISLLAETNRHPFDLPEAEAELVSG-YNVEYSSMPFALFFLGEYANM--------------ILGSAMMTIFFLGGWYPPLKLSLLYKIPGLIWFVL--KIVLLLF-----IFVWTRATIPRYR------------YDQLMRLGWKVFLPISVLWVILISGVLLFTGNL---PGRGL--------- |
| 1K92 Chain:A ((1-444)) | TTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVNPIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQGRWFDSQALMLRDSLQRWVASQITGEVTLELRRGNDYSILNTVSENLTYKPERLTMEKGDSVFSPDDRIGQLTMRNLDITDTREKLFGYAKTGLLSSSAASGVPQVENLENK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K92.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -363253 for 2602 contacts (-139.6/contact) +
2D Compatibility (PS) -35971 + (NN) -8692 + (LL) 0
1D Compatibility (HY) 8800 + (ID) 2250
Total energy: -401366.0 ( -154.25 by residue)
QMean score : 0.196
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