Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKFLLKPKKSLGQNFILSSEITKRIVVLAGNLEDFNVIEIGPGYGALTKEILAH--NPKS-LLAIEKDSNLVKCHDQLLNE----HQGKFRIVEADALYVVEEELIERP-----VKVIANLPYNISLALFLKWLNKIKLFTTFTLMFQKEVADRIIARPNSKDYGSLSVLSQLLCDIRREFDIEPKEFFPRPKVYSSVITVKP-LPTQRFAVNLEALTKLTRAVFAQRRKMLRNSLQNVTNRTETALENAKLSGNERPKNLTVEQFCLLANNM
3UZU Chain:A ((18-270))
---------KRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAG-------DAL-TFDFGSIARPGDEPSLRIIGNLPYNISSPLLFHLMSFAPVVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKLIDVPPESFQPPPKVDSAIVRMIPHAPHELPAVDPAVLGEVVTAAFSQRRKMLRNTLGGYRDLVDFDALGFDLA--RRAEDIGVDEYVRVAQAV
General information:
TITO was launched using:
RESULT:
Template:
3UZU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132529 for 1813 contacts (-73.1/contact) +
2D Compatibility (PS) -25392 + (NN) -8355 + (LL) 1588
1D Compatibility (HY) -19200 + (ID) 4150
Total energy: -188038.0 ( -103.72 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_3UZU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UZU-query.scw
PDB file :
Tito_Scwrl_3UZU.pdb
: