Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKYIVFVLSYILGSIPFSLVITK-IKGINLREVGSGNIGATNVARTGSKCIAALALLLDSLKGFIAVYIAKQFFDDGSFHMYASAILVVLGHMFPVWLKFSGGKGVATTLGILIALNISLVLAFVFVWLAVFFAFRYSSLASLTSTIAAVLSSFFFQRDLFFTLLTVAILIFFKHYRNIVNLLQGRERKFS |
2JPJ Chain:A ((12-22)) | ----------------RVAYWVGKALGNLSDVNQASRINRKKKH---------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -920 for 28 contacts (-32.9/contact) +
2D Compatibility (PS) -1002 + (NN) -352 + (LL) 15096
1D Compatibility (HY) -2000 + (ID) 50
Total energy: 10772.0 ( 384.71 by residue)
QMean score : 0.159
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