Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSGINNFMNEVLFFKIFYVPFI---ILLVAFGYIFLTLRFKFLNIRMFK-HAFTILCGKYDTDHHDGHITHFQ---AFVIALSSTVGLGTVAGVAIAVSMGGPGAIPWMMITGFFGMSAKFAEVTLAFRHR----------TEGQEQLFSGPFQYIRNGLEEFG-------------FKKLGIILAAVYAVFFVLSGLGGSVAFQT--------NQMVSILSGYSNWVDSHPWFLSSI-----ISALLALVII-----------------GGIRRI-----ARVSSALVPVMSLIYI--FSCITIITFNIHNFSNVF------KILFSNMIDFNA----------VG--GGVVG--------AFVAGIQRAIFASEAGVGSASITHAVA----KDEEPVRTGLVAMIEPCFDTMLICCLTGITIVITGAYQTGIGEGILVTQKAFETVSSWFPIFLIIAAPLFAFSSVISFVYCCEMGWLYLFGAK-SIVIYRIAVVV------VAFFSGLSKDIMAIANIGGTLFSCLALINMTALILFSSQINDEVQCYSKRLRNNKIN-------------------------------------------------------------------------------------------------------------- |
| 4M1K Chain:A ((6-688)) | -------EYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRIAAVTTCFWKDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGV-EPQSETVWRQAEKYKVPRIAFANKMDKTGADLWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYVGRLTFIRVYSGTLTSGSYVYNTTKGRKERVARLLRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVILESIEVPEPVIDVAIEPKTKADQEKLSQALARLAEEDPTFRVSTHPETGQTIISGM-------GELHLEIIVDRLKREFKVDANVGKPQVAYRETITKPVDVEGKFIRLTGGRGQYGHVKIKVEPLPRGSGFEFVNAIVGGVIPKEYIPAVQKGIEEAMQSGPLIGFPV-VDIKVTLYDGSYHEVDSSEMAFKIAGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGNAQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -396810 for 3107 contacts (-127.7/contact) +
2D Compatibility (PS) -46644 + (NN) 2647 + (LL) 404
1D Compatibility (HY) -12000 + (ID) 3600
Total energy: -456003.0 ( -146.77 by residue)
QMean score : 0.071
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