Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLVALKFIAIGLSVLGI-------LGAGLGVANIFSTMLSGLARNPESEGKMKIYVYVGAGMVEFTGLLAFVLAMLLMFVA
3ZK2 Chain:A ((1-80))
MDLLTAKTIVLGCSAVGAGLAMIAGLGPGIGEGYAAGKAVESVARQPEARGSIISTMILGQAVAESTGIYSLVIALILLYAN
General information:
TITO was launched using:
RESULT:
Template:
3ZK2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35192 for 382 contacts (-92.1/contact) +
2D Compatibility (PS) -7525 + (NN) -5482 + (LL) 0
1D Compatibility (HY) -5600 + (ID) 1200
Total energy: -54999.0 ( -143.98 by residue)
QMean score : 0.161
(partial model without unconserved sides chains):
PDB file :
Tito_3ZK2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZK2-query.scw
PDB file :
Tito_Scwrl_3ZK2.pdb
: