Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHDIEYIRQNSEEFEKAMESRGMKEFSAEEILKVDHKKRLLTTKLQDLNRQRNEITKKIKELKMSKSPCE-------------------------KQIKSSKNITNE--IEAISLKEQMEKDKLVNILSNLPNIPVQGVPIGAGENSNLEVRR------YREKRQFDFVPKSHYELGERLGLMDFEQAAKISGSRFAILKGQLAKLGRALINFMLEMHVNEFGYTEVYHPVLVKNEAMYNVGQLPKFSDDSYL------------TTDELRLIPTGEVVLTNSVADKIVEEKKLPIRFTAYSECFRKEAGSAGQSTRGMIRQHQFGKVE--LVSITTEDQSNDELERMTGVAEEILKRLELPYRVILLCSGDMGFAAQKTYDIEVWLPEQNRYREISSCSNCGNFQARRMNAKYSLEANKKVKK--YVHTLNGSALAIGRTIIAVMENYQNPDGSITIPNVLQKYISNGTVISK |
| 4L87 Chain:A ((32-462)) | ---------------------------VDQLVKADSEWRRCRFRADNLNKLKNLCSKTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERIKLEAERFEN-LREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKY-------SHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYG-QTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99029 for 2901 contacts (-34.1/contact) +
2D Compatibility (PS) -41528 + (NN) -21419 + (LL) 3056
1D Compatibility (HY) -28000 + (ID) 6700
Total energy: -193620.0 ( -66.74 by residue)
QMean score : 0.374
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